Recent Publications

Balko JM, Cook RS, Vaught DB, Kuba MG, Miller TW, Bhola NE, Sanders ME, Granja-Ingram NM, Smith JJ, Meszoely IM, Salter J, Dowsett M, Stemke-Hale K, Gonzalez-Angulo AM, Mills GB, Pinto JA, Gomez HL, Arteaga CL (2012). Profiling of residual breast cancers after neoadjuvant chemotherapy identifies DUSP4 deficiency as a mechanism of drug resistance. Nat Med [Epub ahead of print]. PMCID: PMC – In process Link

Balko JM, Mayer IA, Sanders ME, Miller TW, Kuba MG, Meszoely IM, Wagle N, Garraway LA, Arteaga CL (2012). Discordant cellular response to pre-surgical letrozole in bilateral synchronous ER+ breast cancers with a KRAS mutation or FGFR1 gene amplification. Mol Cancer Ther [Epub ahead of print]. PMCID: PMC – In process Link

Chang LJ, Eastman A (2012). Differential regulation of p21 (waf1) protein half-life by DNA damage and Nutlin-3 in p53 wild-type tumors and its therapeutic implications. Cancer Biol Ther 13(11). PMCID: PMC – In process Link

Coria A, Noel F, Bonhomme J, Rouzier V, Perodin C, Marcelin A, Li Z, Tosteson TD, Deschamps MM, Wright PF, Pape JW (2012). Consideration of post-partum management in HIV-positive Haitian women: An analysis of CD4 decline, mortality, and follow-up after delivery. J Acquir Immune Defic Syndr [Epub ahead of print]. PMCID: PMC – In process Link

Cote ML, Liu M, Bonassi S, Neri M, Schwartz AG, Christiani DC, Spitz MR, Muscat JE, Rennert G, Aben KK, Andrew AS, Bencko V, Bickerboller H, Boffetta P, Brennan P, Brenner H, Duell EJ, Fabianova E, Field JK, Foretova L, Friis S, Harris CC, Holcatova I, Hong YC, Isla D, Janout V, Kiemeney LA, Kiyohara C, Lan Q, Lazrus P, Lissowska J, Le Marchand L, Mates D, Matsuo K, Mayordomo JI, McLaughlin JR, Morgenstern H, Mueller H, Orlow I, Park BJ, Pinchev M, Raji OY, Rennert HS, Rundnai P, Seow A, Stucker I, Szeszenia-Dabrowska N, Dawn Teare M, Tjonnelan A, Ugolini D, van der Heijden HF, Wichmann E, Wiencke JK, Woll PJ, Yang P, Zaridze D, Zhang ZF, Etzel CJ, Hung RJ (2012) . Increased risk of lung cancer in individuals with a family history of the disease: A pooled analysis from the International Lung Cancer Consortium. Eur J Cancer 48(13):1957-1968. PMCID: PMC – In process Link

Crump RT, Llewellyn-Thomas HA (2012). The importance of measuring strength-of-preference scores for health care options in preference-sensitive care. J Clinical Epidemiol 65(8):887-896. PMCID: PMC3383345. Link

Davis KL, Barth RJ, Jr., Gui J, Dann E, Eisenberg B, Rosenkranz K (2012). Use of MRI in preoperative planning for women with newly diagnosed DCIS: Risk or benefit? Ann Surg Oncol [Epub ahead of print]. PMCID: PMC – In process Link

De Boer RH, Kotasek D, White S, Koczwara B, Mainwaring P, Chan A, Melara R, Ye Y, Adewoye A, Sikorski R, Kaufman P (2012). Phase 1b dose-finding study of motesanib with docetaxel or paclitaxel in patients with metastatic breast cancer. Breast Cancer Res Treat 135(1):241-252. PMCID: PMC – In process Link
Genuario JW, Donegan RP, Hamman D, Bell JE, Boublik M, Schlegel T, Tosteson AN (2012). The cost-effectiveness of single-row compared with double-row arthroscopic rotator cuff repair. J Bone Joint Surg Am 94(15):1369-1377. PMCID: PMC – In process Link

Grant GD, Gamsby J, Martyanov V, Brooks L, 3rd, George LK, Mahoney JM, Loros JJ, Dunlap JC, Whitfield ML (2012). Live-cell monitoring of periodic gene expression in synchronous human cells identifies Forkhead genes involved in cell cycle control. Mol Biol Cell 23(16):3079-3093. PMCID: PMC3418304. Link

Grzegorczyk TM, Meaney PM, Kaufman PA, Diflorio-Alexander RM, Paulsen KD (2012). Fast 3-d tomographic microwave imaging for breast cancer detection. IEEE Trans Med Imaging 31(8):1584-1592. PMCID: PMC – In process Link

Guo Y, Pino-Lagos K, Ahonen CA, Bennett KA, Wang J, Napoli JL, Blomhoff R, Sockanathan S, Chandraratna RA, Dmtirovsky E, Turk MJ, Noelle RJ (2012). A retinoic acid-rich tumor microenvironment provides clonal survival cues for tumor-specific CD8+ T cells. Cancer Res [Epub ahead of print]. PMCID: PMC – In process Link

Haasenritter J, Aerts M, Bosner S, Buntinx F, Burnand B, Herzig L, Knottnerus JA, Minalu G, Nilsson S, Renier W, Sox C, Sox H, Donner-Banzhoff N (2012). Coronary heart disease in primary care: Accuracy of medical history and physical findings in patients with chest pain - a study protocol for a systematic review with individual patient data. BMC Family Practice 13(1):81. PMCID: PMC – In process Link

Hager MH, Morley S, Bielenberg DR, Gao S, Morello M, Holcomb IN, Liu W, Mouneimne G, Demichelis F, Kim J, Solomon JR, Adam RM, Isaacs WB, Higgs HN, Vessella RL, DiVizio D, Freeman MR (2012). DIAPH3 governs the cellular transition to the amoeboid tumour phenotype. EMBO Mol Med 4(8):743-760. PMCID: PMC – In process Link

Heddle NM, Fung M, Hervig T, Szczepiorkowski ZM, Torretta L, Arnold E, Lane S, Murphy MF (2012). Challenges and opportunities to prevent transfusion errors: A Qualitative Evaluation for Safer Transfusion (QUEST). Transfusion 52(8):1687-1695. PMCID: PMC – In process Link

Hickey DK, Fahey JV, Wira CR (2012). Mouse estrous cycle regulation of vaginal versus uterine cytokines, chemokines, alpha-/beta-defensins and TLRs. Innate Immun [Epub ahead of print]. PMCID: PMC – In process Link

Jensen AL, Collins J, Shipman EP, Wira CR, Guyre PM, Pioli PA (2012). A Subset of Human Uterine Endometrial Macrophages is Alternatively Activated. Am J Reprod Immunol [Epub ahead of print], PMCID: PMC – In process Link

Kahlenberg CA, Fadul CE, Roberts DW, Thadani VM, Bujarski KA, Scott RC, et al (2012). Seizure prognosis of patients with low-grade tumors. Seizure 21(7):540-545. PMCID: PMC – In process Link

Kaidery NA, Banerjee R, Yang L, Smirnova NA, Hushpulian DM, Liby KT, Williams CR, Yamamoto M, Kensler TW, Ratan RR, Sporn MB, Beal MF, Gazaryan IG, Thomas B (2012). Targeting Nrf2-Mediated Gene Transcription by Extremely Potent Synthetic Triterpenoids Attenuate Dopaminergic Neurotoxicity in the MPTP Mouse Model of Parkinson's Disease. Antioxid Redox Signal [Epub ahead of print]. PMCID: PMC – In process Link

Kim N, Andrews P, F WA, Frost HR, S MW, Harris BT, Read C, Askland K, Moore JH (2012). Gene ontology analysis of pairwise genetic associations in two genome-wide studies of sporadic ALS. BioData Min 5(1):9. PMCID: PMC – In process Link

Klibansky D, Rothstein RI (2012). Robotics in endoscopy. Curr Opin Gastroenterol 28(5):477-482. PMCID: PMC – In process Link

Larsson L, Pehrson C, Dechen T, Crane-Godreau M. Microbiological components in mainstream and sidestream cigarette smoke. Tob Induc Dis. 2012;10(1):13. PMCID: PMC – In process Link

Laughney AM, Krishnaswamy V, Rizzo EJ, Schwab MC, Barth RJ, Pogue BW, et al. Scatter spectroscopic imaging distinguishes between breast pathologies in tissues relevant to surgical margin assessment. Clin Cancer Res. 2012. PMCID: PMC – In process Link

Lewis LD, Ratain MJ. Might cigarettes be a "smoking gun" to reduce taxane myelotoxicity? Clin Cancer Res. 2012;18(16):4219-21. PMCID: PMC – In process Link

Lynch M, Dahlin C, Bakitas M. Bowel obstruction and delirium. Clinical journal of oncology nursing. 2012;16(4):391-8. PMCID: PMC – In process Link

Lyons KD, Hegel MT, Hull JG, Li Z, Balan S, Bartels S. Reliability and Validity of the Valued Activity Inventory for Adults with Cancer (VAI-AC). OTJR : occupation, participation and health. 2012;32(1):238-45. PMCID: PMC3401041. Link

Lyons KD, Hegel MT, Hull JG, Li Z, Balan S, Bartels S (2012). Reliability and Validity of the Valued Activity Inventory for Adults with Cancer (VAI-AC). OTJR : occupation, participation and health 32(1):238-245. PMCID: PMC3401041. Link

Ma J, Xiao F, Xiong M, Andrew AS, Brenner H, Duell EJ, et al. Natural and Orthogonal Interaction Framework for Modeling Gene-Environment Interactions with Application to Lung Cancer. Hum Hered. 2012;73(4):185-94. PMCID: PMC – In process Link

Madan JC, Koestler DC, Stanton BA, Davidson L, Moulton LA, Housman ML, Moore JH, Guill MF, Morrison MG, Sogin ML, Hampton TH, Karagas MR, Palumbo PE, Foster JA, Hibberd PL, O’Toole GA (2012). Serial Analysis of the Gut and Respiratory Microbiome in Cystic Fibrosis in Infancy: Interaction between Intestinal and Respiratory Tracts and Impact of Nutritional Exposures. MBio 3(4). PMCID: PMC – In process Link

Meaney P, Goodwin D, Golnabi A, Zhou T, Pallone M, Geimer S, Burke G, Paulsen K (2012). Clinical Microwave Tomographic Imaging of the Calcaneus: A First-in-Human Case Study of Two Subjects. IEEE Trans Biomed Eng [Epub ahead of print]. PMCID: PMC – In process Link

Michaelsen K, Krishnaswamy V, Pogue BW, Poplack SP, Paulsen KD (2012). Near-infrared spectral tomography integrated with digital breast tomosynthesis: Effects of tissue scattering on optical data acquisition design. Med Phys 39(7):4579-4587. PMCID: PMC3412435. Link

Milloy JA, Faherty BK, Gerber SA (2012). Tempest: GPU-CPU Computing for High-Throughput Database Spectral Matching. J Proteome Res 11(7):3581-91. PMCID: PMC3397144. Link

Moreira KE, Schuck S, Schrul B, Frohlich F, Moseley JB, Walther TC, Walter P (2012). Seg1 controls eisosome assembly and shape. J Cell Biol 198(3):405-420. PMCID: PMC3413353. Link

O'Donnell JF (2012). On Being an Editor. J Cancer Educ [Epub ahead of print]. PMCID: PMC – In process Link

O'Toole GA, Wathier M, Zegans ME, Shanks RM, Kowalski R, Grinstaff MW (2012). Diphosphonium ionic liquids as broad-spectrum antimicrobial agents. Cornea 31(7):810-806. PMCID: PMC3336019. Link

Petrella BL, Armstrong DA, Vincenti MP (2012). Interleukin-1 beta and transforming growth factor-beta 3 cooperate to activate matrix metalloproteinase expression and invasiveness in A549 lung adenocarcinoma cells. Cancer Lett [Epub ahead of print]. PMCID: PMC – In process Link

Primack BA, Hendricks KM, Longacre MR, Adachi-Mejia AM, Weiss JE, Titus LJ, Beach ML, Dalton MA (2012). Parental efficacy and child behavior in a community sample of children with and without attention-deficit hyperactivity disorder (ADHD). Atten Defic Hyperact Discord [Epub ahead of print]. PMCID: PMC – In process Link

Pronk A, Stewart PA, Coble JB, Katki HA, Wheeler DC, Colt JS, Baris D, Schwenn M, Karagas MR, Johnson A, Waddell R, Verrill C, Cherala S, Silverman DT, Friesen MC (2012). Comparison of two expert-based assessments of diesel exhaust exposure in a case-control study: programmable decision rules versus expert review of individual jobs. Occ Environ Med [Epub ahead of print]. PMCID: PMC – In process Link

Ramabhadran V, Gurel PS, Higgs HN (2012). Mutations to the formin homology 2 domain of INF2 have unexpected effects on actin polymerization and severing. J Biol Chem. PMCID: PMC – In process Link

Rauwerdink CA, Tsongalis GJ, Tosteson TD, Hill JM, Meehan KR (2012). The practical application of chimerism analyses in allogeneic stem cell transplant recipients: Blood chimerism is equivalent to marrow chimerism. Exp Mol Pathol [Epub ahead of print]. PMCID: PMC – In process Link

Rice KP, Klinkerch EJ, Gerber SA, Schleicher TR, Kraus TJ, Buros CM (2012). Thioredoxin reductase is inhibited by the carbamoylating activity of the anticancer sulfonylhydrazine drug laromustine. Mol Cell Biochem [Epub ahead of print]. PMCID: PMC – In process Link

Robbins CS, Chudnovskiy A, Rauch PJ, Figueiredo JL, Iwamoto Y, Gorbatov R, Etzrodt M, Weber GF, Ueno T, van Rooijen N, Mulligan-Kehoe MJ, Libby P, Pittet MJ, Weissleder R, Swirski FK (2012). Extramedullary hematopoiesis generates Ly-6C(high) monocytes that infiltrate atherosclerotic lesions. Circulation 125(2):364-374. PMCID: 3263762. Link

Schnurr PP, Friedman MJ, Oxman TE, Dietrich AJ, Smith MW, Shiner B, Forshay E, Gui J, Thurston V (2012). RESPECT-PTSD: Re-engineering systems for the primary care treatment of PTSD, A randomized controlled trial. J Gen Intern Med [Epub ahead of print]. PMCID: PMC – In process Link

Siersema PD, Rastogi A, Leufkens AM, Akerman PA, Azzouzi K, Rothstein RI, Vleggaar FP, Repici A, Rando G, Okolo PI, Dewit O, Ignjatovic A, Odstrcil E, East J, Deprez PH, Saunders BP, Kalloo AN, Creel B, Singh V, Lennon AM, Demarco DC (2012). Retrograde-viewing device improves adenoma detection rate in colonoscopies for surveillance and diagnostic workup. World J Gastroenterol 18(26):3400-3408. PMCID: PMC3396192. Link

Simone EA, Zern BJ, Chacko AM, Mikitsh JL, Blankemeyer ER, Muro S, Stan RV, Muzykantov VR (2012). Endothelial targeting of polymeric nanoparticles stably labeled with the PET imaging radioisotope iodine-124. Biomaterials 33(21):5406-5413. PMCID: PMC3356447. Link

Sox HC (2012). Quality of life and guidelines for PSA screening. N Engl J Med 367(7):669-671. PMCID: PMC – In process Link

Sporn MB, Liby KT (2012). NRF2 and cancer: The good, the bad and the importance of context. Nat Rev Cancer 12(8):564-571. PMCID: PMC – In process Link

Swartz HM, Flood AB, Williams BB, Dong R, Swarts SG, He X, Grinberg O, Sidabras J, Demidenko E, Gui J, Gladstone DJ, Jarvis LA, Kmiec MM, Kobayashi K, Lesniewski PN, Marsh SD, Matthews TP, Nicolalde RJ, Pennington PM, Raynolds T, Salikhov I, Wilcox DE, Zaki BI (2012). Electron paramagnetic resonance dosimetry for a large-scale radiation incident. Health Phys 103(3):255-267. PMCID: PMC – In process Link
Tichauer KM, Holt RW, Samkoe KS, El-Ghussein F, Gunn JR, Jermyn M, Dehghani H, Leblond F, Pogue BW (2012). Computed tomography-guided time-domain diffuse fluorescence tomography in small animals for localization of cancer biomarkers. J Vis Exp (65). PMCID: PMC – In process Link

Titus LJ, Clough-Gorr K, Mackenzie TA, Perry A, Spencer SK, Weiss J, Abrahams-Gessel S, Ernstoff MS (2012). Recent skin self-examination and doctor visits in relation to melanoma risk and tumor depth. Br J Dermatol [Epub ahead of print]. PMCID: PMC – In process Link

Torosean S, Flynn B, Axelsson J, Gunn J, Samkoe KS, Hasan T, Doyley MM, Pogue BW (2012). Nanoparticle uptake in tumors is mediated by the interplay of vascular and collagen density with interstitial pressure. Nanomedicine [Epub ahead of print]. PMCID: PMC – In process Link

Urbach D, Lupien M, Karagas MR, Moore JH (2012). Cancer heterogeneity: Origins and implications for genetic association studies. Trends Genet [Epub ahead of print]. PMCID: PMC – In process Link

Valdes PA, Moses ZB, Kim A, Belden CJ, Wilson BC, Paulsen KD, Roberts DW, Harris BT (2012). Gadolinium- and 5-aminolevulinic acid-induced protoporphyrin IX levels in human gliomas: An ex vivo quantitative study to correlate protoporphyrin IX levels and blood-brain barrier breakdown. J Neuropathol Exp Neurol [Epub ahead of print]. PMCID: PMC – In process Link

van Bemmel D, Lenz P, Liao LM, Baris D, Sternberg LR, Warner A, Johnson A, Jones M, Kida M, Schween M, Schned AR, Silverman DT, Rothman N, Moore LE (2012). Correlation of LINE-1 methylation levels in patient-matched buffy coat, serum, buccal cell, and bladder tumor tissue DNA samples. Cancer Epidemiol Biomarkers Prev 21(7):1143-1148. PMCID: PMC3397796. Link

Wagner DD, Heatherton TF (2012). Self-Regulatory Depletion Increases Emotional Reactivity in the Amygdala. Soc Cogn Affect Neurosci [Epub ahead of print]. PMCID: PMC – In process Link

Wang T, Kettenbach AN, Gerber SA, Bailey-Kellogg C (2012). Response to 'comments on "MMFPh: A maximal motif finder for phosphoproteomics datasets"'. Bioinformatics 28(16):2213. PMCID: PMC – In process Link

Wei J, Fang F, Lam AP, Sargent JL, Hamburg E, Hinchcliff ME, Gottardi CJ, Atit R, Whitfield ML, Varga J (2012). Wnt/beta-catenin signaling is hyperactivated in systemic sclerosis and induces Smad-dependent fibrotic responses in mesenchymal cells. Arthritis Rheum 64(8):2734-2745. PMCID: PMC – In process Link

Woloshin S, Schwartz LM (2012). How a charity oversells mammography. BMJ 345:e5132. PMCID: PMC – In process Link

Wong J, D'Alimonte L, Angus J, Paszat L, Metcalfe K, Whelan T, Llewellyn-Thomas H, Warner E, Franssen E, Szumacher E (2012). Development of patients' decision aid for older women with stage I breast cancer considering radiotherapy after lumpectomy. Int J Radiat Oncol Biol Phys 84(1):30-38. PMCID: PMC – In process Link

Yawn BP, Dietrich AJ, Wollan P, Bertram S, Graham D, Huff J, Kurland M, Madison S, Pace WD (2012). TRIPPD: A practice-based network effectiveness study of postpartum depression screening and management. Ann Fam Med 10(4):320-329. PMCID: PMC3392291. Link

Yawn BP, Olson AL, Bertram S, Pace W, Wollan P, Dietrich AJ (2012). Postpartum depression: Screening, diagnosis, and management programs 2000 through 2010.  Depress Res Treat 2012:363964. PMCID: PMC3413986. Link

Zegans ME, Wozniak D, Griffin E, Toutain-Kidd CM, Hammond JH, Garfoot A, Lam JS (2012). Pseudomonas aeruginosa exopolysaccharide Psl promotes resistance to the biofilm inhibitor polysorbate 80. Antimicrob Agents Chemother 56(8):4112-4122. PMCID: PMC – In process Link

Zhang T, Wu MR, Sentman CL (2012). An NKp30-based chimeric antigen receptor promotes T cell effector functions and antitumor efficacy In vivo. J Immunol [Epub ahead of print]. PMCID: PMC – In process Link

Zhang X, Cowper-Sal Lari R, Bailey SD, Moore JH, Lupien M (2012). Integrative functional genomics identifies an enhancer looping to the SOX9 gene disrupted by the 17q24.3 prostate cancer risk locus. Genome Res 22(8):1437-1446. PMCID: PMC – In process Link